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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs67297533 chr6:28141253 G/T BTN3A2 chr6:26365387-26378548:+ -0.84 -11.36 1.2E-26 Box Plot
THCA rs67297533 chr6:28141253 G/T RNF5P1 chr8:38458179-38458718:- 0.75 6.3 6.76E-10 Box Plot
THCA rs67297533 chr6:28141253 G/T ZFP57 chr6:29640169-29648887:- 0.97 8.92 1.02E-17 Box Plot
THCA rs6729910 chr2:113229110 C/T RGPD5 chr2:110550335-110615272:+ -0.47 -6.88 1.84E-11 Box Plot
THCA rs67306706 chr1:111155646 A/C DLD chr7:107531415-107572175:+ -0.28 -6.45 2.72E-10 Box Plot
THCA rs6730933 chr2:101162104 G/A LOC285359 chr3:101431278-101432259:+ 0.36 6 3.98E-9 Box Plot
THCA rs6731045 chr2:101127277 G/C LOC285359 chr3:101431278-101432259:+ 0.3 6.04 3.12E-9 Box Plot
THCA rs6731490 chr2:132234847 A/G TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs6731616 chr2:132234986 A/G TUBA3E chr2:130949316-130956034:- 0.53 6.19 1.33E-9 Box Plot
THCA rs67316952 chr5:151678722 TTG/T FILIP1L chr3:99548985-99833357:- -0.23 -6.39 3.88E-10 Box Plot
THCA rs67319329 chr7:66397963 A/T CCT6P1 chr7:65216129-65228341:+ 0.43 6.75 4.26E-11 Box Plot
THCA rs6732023 chr2:132314570 G/C CCDC74B chr2:130896860-130902707:- -0.28 -5.89 7.3E-9 Box Plot
THCA rs6732569 chr2:101122593 G/A LOC285359 chr3:101431278-101432259:+ 0.35 6.8 3.08E-11 Box Plot
THCA rs6733033 chr2:142418651 G/A VPS25 chr17:40925454-40931617:+ 0.21 5.96 4.91E-9 Box Plot
THCA rs6733075 chr2:132189295 A/G CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot